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Advanced Data Wrangling
- Downloading and Importing Data
- Overview of Tidy Data
- Tidy Data Rule #1: Every Column is a Variable
- Tidy Data Rule #3: Every Cell is a Single Value
- Tidy Data Rule #2: Every Row is an Observation
- Changing Variable Types
- Dealing with Missing Data
- Advanced Summarizing
- Binding Data Frames
- Functions
- Data Merging
- Exporting Data
- Bring It All Together (Advanced Data Wrangling)
-
Advanced Data Visualization
- Best Practices in Data Visualization
- Tidy Data
- Pipe Data into ggplot
- Reorder Plots to Highlight Findings
- Line Charts
- Use Color to Highlight Findings
- Declutter
- Add Descriptive Labels to Your Plots
- Use Titles to Highlight Findings
- Use Annotations to Explain
- Tweak Spacing
- Create a Custom Theme
- Customize Your Fonts
- Try New Plot Types
- Bring it All Together (Advanced Data Visualization)
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Quarto
- Advanced Markdown
- Advanced YAML and Code Chunk Options
- Tables
- Inline R Code
- Making Your Reports Shine: Word Edition
- Making Your Reports Shine: PDF Edition
- Making Your Reports Shine: HTML Edition
- Presentations
- Dashboards
- Websites
- Publishing Your Work
- Quarto Extensions
- Parameterized Reporting, Part 1
- Parameterized Reporting, Part 2
- Parameterized Reporting, Part 3
- Wrapping up Going Deeper with R
Going Deeper with R
Declutter
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This lesson is called Declutter, part of the Going Deeper with R course. This lesson is called Declutter, part of the Going Deeper with R course.
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Transcript
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# Load Packages -----------------------------------------------------------
library(tidyverse)
library(fs)
# Create Directory --------------------------------------------------------
dir_create("data")
# Download Data -----------------------------------------------------------
# download.file("https://github.com/rfortherestofus/going-deeper-v2/raw/main/data/third_grade_math_proficiency.rds",
# mode = "wb",
# destfile = "data/third_grade_math_proficiency.rds")
# Import Data -------------------------------------------------------------
third_grade_math_proficiency <-
read_rds("data/third_grade_math_proficiency.rds") |>
select(academic_year, school, school_id, district, proficiency_level, number_of_students) |>
mutate(is_proficient = case_when(
proficiency_level >= 3 ~ TRUE,
.default = FALSE
)) |>
group_by(academic_year, school, district, school_id, is_proficient) |>
summarize(number_of_students = sum(number_of_students, na.rm = TRUE)) |>
ungroup() |>
group_by(academic_year, school, district, school_id) |>
mutate(percent_proficient = number_of_students / sum(number_of_students, na.rm = TRUE)) |>
ungroup() |>
filter(is_proficient == TRUE) |>
select(academic_year, school, district, percent_proficient) |>
rename(year = academic_year) |>
mutate(percent_proficient = case_when(
is.nan(percent_proficient) ~ NA,
.default = percent_proficient
))
# Plot --------------------------------------------------------------------
top_growth_school <-
third_grade_math_proficiency |>
filter(district == "Portland SD 1J") |>
group_by(school) |>
mutate(growth_from_previous_year = percent_proficient - lag(percent_proficient)) |>
ungroup() |>
drop_na(growth_from_previous_year) |>
slice_max(order_by = growth_from_previous_year,
n = 1) |>
pull(school)
third_grade_math_proficiency |>
filter(district == "Portland SD 1J") |>
mutate(highlight_school = case_when(
school == top_growth_school ~ "Y",
.default = "N"
)) |>
mutate(school = fct_relevel(school, top_growth_school, after = Inf)) |>
ggplot(aes(x = year,
y = percent_proficient,
group = school,
color = highlight_school)) +
geom_line() +
scale_color_manual(values = c(
"N" = "grey90",
"Y" = "orange"
)) +
theme_minimal() +
theme(axis.title = element_blank(),
legend.position = "none",
panel.grid = element_blank())
Your Turn
Using a combination of a complete theme and the theme()
function:
Remove the gray background
Remove axis titles
Remove the legend
Remove or minimize grid lines
Learn More
Check out this video from Storytelling with Data, which explains the power of decluttering.
To learn more about how to declutter in ggplot, ggplot2: Elegant Graphics for Data Analysis (3e) Chapter 17.
To learn about all of the theme elements you can customize, check out the ggplot2
documentation website. You might also be interested in Henry Wang's diagram to help you understand working with themes.
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